A database containing information on cg coconut germplasm, cci coconut cultivar identification. Fiji dwarf coconut is one tough nut by alfredo flores may 29, 2008. A coconut improvement program involving agricultural research service scientists in miami, fla. It can be phenotypic data traits, yield, precocity, genotypic data species, pedigree, parentage, material type, generation, or miscellaneous data like attached files or pictures. Names and sources of the kenyan coast coconut germplasm. The germplasm resources information network grin documents these animal, microbial, and plant collections through informational pages, searchable databases, and links to usdaars projects that curate the collections. National plant germplasm system covid19 update, march 23, 2020. Home faq which coconut germplasm is presently conserved by cogent country members.
Jan, 2018 the programme was intended to provide a global overview of the use of gis in coconut research, and more specifically on the following points. International cocoa germplasm database paperback december, 1997. The germplasm resources information network grin web server provides germplasm information about plants, animals, microbes and invertebrates important for food and agricultural production. Based at the university of reading, the project aims to collate information on the origins, characteristics and availability of cocoa germplasm and to make this available to researchers and breeders. Pdf a database for coconut crop improvement researchgate. Icarda, international center for agricultural research in the dry areas. Report of a working session for implementation of the international coconut database. Ag data commons providing central access to usdas open. This activity, which consists of an orderly and systematic germplasm transfer, is held among countries through public and private institutions. Based on 35 sequences data of coconut wrky genes that are available in the genbank database. The coconut genetic resources database project cgrd. This chapter presents the new biotechnological possibilities. You can search the distribution of germplasm accessions in a given geographic area, can map multiple species or restrict it to a single legume taxon, look at the accession details and evaluation data if available, and overlay trait evaluation data on the map. Sisunandar1, sopade pa, samosir ym, rival a, adkins sw.
The package gives details on technologies for coconut cultivation developed and recommended by the cpcri. Morphometric characterization % coconut germplasm introduction exploiting advantages of natural diversity for crop coconut cocos nucifera l. Germplasm databases coconut germplasm database arecanut germplasm database cocoa germplasm database. Management of germplasm collections and enhancing their use by mini core and molecular approaches hd upadhyaya1, cll gowda, and dvssr sastry international crops research institute for. The available coconut germplasm in sri lanka is categorized into three distinct varieties. The project was funded by the french government and. Selected threatened coconut germplasm will be listed for introduction into the international coconut genebank of the south pacific icgsp and in the international coconut genetic resources database cgrd, available for future generations of researchers, farmers, consumers and other users. Biotechnology and germplasm conservation managing global. Vegetable oil database microbial information systems on plantation crops mifspc coconut disease database coconut cultivar identification pest control management system corpk database. Data were collected and assembled with genotyper 2. Now that there is need to expand the coconut genetic base and crop improvement, this investigation would play an instructive role in coconut breeding and germplasm resources improvement of coconut in nigeria. This is a germplasm selection software application based the further elaboration of an r statistical application called explora initial development for which was commissioned to a software engineering consultant, johann ospina, by maarten van zonneveld bioversitycosta rica, in collaboration with jacob van etten also of bioversitycosta.
Various molecular markers viz, rapd, rflp and ssr used for studying the genetic diversity in coconut germplasm. The international coconut genetic resources network cogent includes 39 country members. Sugarcane germplasm database was developed for 45 descriptors on 1 germplasm accessions using mysql 5. This activity, which consists of an orderly and systematic germplasm. Cryopreservation of coconut germplasm springerlink. The development of biotechnology has led to the production of a new category of germplasm including clones obtained from elite genotypes, cell lines with special attributes, and genetically transformed material engelmann, 1991.
The primary mission of the plant germplasm introduction and testing research unit is to acquire, maintain, evaluate, enhance, characterize, document and distribute assigned genetic resources of the usda ars national plant germplasm. Characteristics of different forms of these three varieties are shown in. This new information will greatly contribute towards characterization of the mardis coconut germplasm collection and to develop a ssr tool for the identification of new coconut varieties in malaysia. There are many field collections of coconuts in various countries, usually connected with coconut research institutes. Faoibpgr technical guidelines for the safe movement of coconut germplasm pages. Gringlobal gg is a database application that enables genebanks to store and manage information associated with plant genetic resources germplasm and deliver that information globally.
National cotton germplasm collection its contents, preservation, characterization, and evaluation richard g. Breeding management system integrated breeding platform. A database containing information on cg coconut germplasm, cci. Musatabmgis musa germplasm information system database 8 musatab version 1. Welcome to thecocktaildb an open, crowdsourced database of drinks and cocktails from around the world.
Coconut microsatellite database phytoplasma database memco vegetable oil database microbial information systems on plantation crops mifspc coconut disease database coconut cultivar identification pest control management system corpk database. With the help of capterra, learn about coconut software, its features, pricing information, popular comparisons to other appointment scheduling products and more. Fourteen ioop researchers and technical staff participated the training. Notice that 3 lists of example germplasm are available in the program lists folder if the example germplasm. This new germplasm is often of high added value and very difficult to produce. The project examined methods for the enhancement of germplasm resources and development of improved cultivars.
National plant germplasm system npgs is collaborative effort to safeguard the genetic diversity of agriculturally important plants. Most importantly, the international guidelines for transfer of coconut germplasm. As a portable source of food, water, fuel, and construction materials, the coconut cocos nucifera l. Insitu morphological characterization of coconut in the. Germplasm definition of germplasm by merriamwebster. Country reports on status of coconut genetic resources research south asia india v rajagopal, pm kumaran, s. The programme was intended to provide a global overview of the use of gis in coconut research, and more specifically on the following points. If you continue browsing the site, you agree to the use of cookies on this website.
Curators can be informed of what exists in other genebanks and request germplasm transfers. Analyses using the structure software showed all 23 varieties to be clustered into 21 genotypic groups. Phylogenetic tree construction, using the neighbour joining method, revealed that the. A database containing information on cg coconut germplasm, cci coconut cultivar identification, cd coconut. Pattern of genetic diversity and variability in germplasm.
The npgs is managed by the agricultural research service. Microsatellite marker based characterization of south. Independent origins of cultivated coconut cocos nucifera. Outreach included programs conducted with practical farmers of iowa and isu extension disseminating information about forages, small grains, soybeans and corn. A database containing information on cg coconut germplasm, cci coconut cultivar identification, cd coconut disease, mifspc microbial information systems in plantation crops and vo vegetable oils is described. Coconut crop improvement requires a number of biotechnology and bioinformatics tools. Management of germplasm collections and enhancing their use by mini core and molecular approaches hd upadhyaya1, cll gowda, and dvssr sastry international crops research institute for the semiarid tropics icrisat, patancheru 502 324, andhra pradesh, india abstract genetic resources provide basic material for selection and improvement through.
Coconut genetic resources bioversity international. Management of germplasm collections and enhancing their use. Bourdeix in 1993 to the cogent steering committee meeting held in montpellier, france. Grin is operated by the national germplasm resources laboratory in beltsville, md. Barley genetic stocks database gene and allele descriptions from the barley genetics newsletter, compiled in database form by udda lundqvist and morten hulden. As a way of shaping and using genetic information, biotechnology has implication for germplasm conservation and use. A worldwide coconut germplasm collection 79 genotypes was analyzed for genetic diversity and population structure based on 48 simple sequence repeat ssr loci. Germplasm resources information network grin ag data. Based on 35 sequences data of coconut wrky genes that are available in the genbank database, we have identified eight informative snps and used them to generate snpspecific primers. The agricultural research services national animal germplasm program operates a gene bank for livestock, aquatic, poultry and insect genetic resources. In cogents coconut genetic resources database, data about coconut cultivars. Status, gaps and strategy in coconut germplasm collecting r bourdeix, l guarino, v ramanatha rao and l baudouin in vitro collecting of coconut germplasm f engelmann chapter 3. The idea of making an illustrated coconut germplasm catalogue as a printed book was first presented by r.
The crop germplasm research unit reflects the ars program plan of mission oriented research and is focused on needs not addressed by the private sector, nonars research agencies, or that are uniquely suited to the ars program. The files will be automatically copied to the connected tablet using a usb cable. We also offer a free json api for anyone wanting to use it. Molecular biology dna based markers possess the significantly increase the efficiency of coconut breeding programmes. Before requesting germplasm, scientists should consider their capacity to receive it. Cogent network which coconut germplasm is presently. The gringlobal projects mission is to provide a scalable version of the germplasm resource information network grin suitable for use by any interested. Evaluating different forms of transport of embryos and endosperm discs of giant coconut. An appropriate conservation strategy for a particular plant gene pool requires a holistic approach, combining the different ex situ and in situ. Management of germplasm collections and enhancing their. In the last decade, a worldwide coconut germplasm collection.
At presently, work on characterization of conserved coconut germplasm. Coconut database 18 cogent bulletin board adb and ifad funded project annual meetings19. The distributed information sub centre subdic under the biotechnology information system network btisnet programme of the department of biotechnology, government of india, new delhi, was established at cpcri in december 2000. The international coconut genetic resources database c hamelin, r bourdeix and l baudouin.
This is exemplified by exchanges with the genesys multicrop database, where coconut data transmitted more than 18 months ago is yet to be included in this database 20. Report of a working session for implementation of the international coconut database held at cirad, montpellier, france, 1922 may 1992. Therefore, genetic resources of coconut are maintained mainly in field genebanks. The international coconut genetic resources database. Coconut, genetic diversity, germplasm, microsate llite, sri lanka introduction coconut. Based at the university of reading, the project aims to collate information on the origins, characteristics and availability of cocoa germplasm. Development of snap markers based on nucleotide variability. The npgs is managed by the agricultural research service ars, the inhouse research agency of the united states department of agriculture usda.
Quantitative characterization of nut yield and fruit. The main coconut product, copra dried kernel, and its derivatives coconut oil, copra cake, plus desiccated coconut represent a major source of foreign exchange. Here we investigated the coconut s domestication history and its population genetic structure as it relates to human dispersal patterns. To promote the international coconut genebank for latin and caribbean sergipe, brazil enrichment and exchange, it is necessary to implement the exchange of accessions. Software on integrated disease management idm in coconut. A germplasm management system enables to store different types of data which are crucial to define the nature of the genotype material. Biotechnology requires germplasm, as both raw material and a source of natural variation. Germplasm definition is germ cells and their precursors serving as the bearers of heredity. Author see all formats and editions hide other formats and. Strategies for exchange of coconut germplasm in brazil. Germplasm collection, storage, and conservation sciencedirect. Conservation of coconut germplasm has been undertaken globally in view of its economic importance.
A database containing information on cg coconut germplasm, cci coconut cultivar. Since 2000, the cogent network, bioversity and cirad have been collaborating to develop and publish this catalogue of coconut germplasm. Research on coconut genetic resources in africa and the indian ocean a kullaya and jl konan research on coconut genetic resources in latin america and the caribbean d zizumbo, b been, e tupinamba, r castillo and c oropeza chapter 9. Bibliographic literature database coconut literature database. This chapter discusses these opportunities and the allocation of resources. The national animal germplasm program provides genetic security and. The floral characters were efficient in assessing genetic divergence with selfing. The international cocoa germplasm database icgd is an information service for the cocoa research community. Germplasm search ecotype natural variant search if you are looking for specific natural variants, please use our ecotype natural variant search which allows you to narrow your search using collection details. Independent origins of cultivated coconut cocos nucifera l. This research was designed to evaluate nine sri lankan indigenous coconut germplasm. You will be able to select the descriptors you want to observe. The coconut genetic resources database project cgrd was initiated in 1994. Up to now, only 23 countries have provided data on their genebanks see table 1.
652 13 463 1449 694 708 1186 338 228 651 203 724 899 772 638 1457 91 387 1396 918 63 308 76 633 928 1256 219 826 576 1009 1456 178 1440 1191